Xref

class Xref(*, val: str, predicate_raw: str = 'oboinowl:hasDbXref', predicate: Reference | None = None, value: Reference | None = None, standardized: bool = False)[source]

Bases: BaseModel, StandardizeMixin

Represents a cross-reference.

Create a new model by parsing and validating input data from keyword arguments.

Raises [ValidationError][pydantic_core.ValidationError] if the input data cannot be validated to form a valid model.

self is explicitly positional-only to allow self as a field name.

Attributes Summary

model_computed_fields

A dictionary of computed field names and their corresponding ComputedFieldInfo objects.

model_config

Configuration for the model, should be a dictionary conforming to [ConfigDict][pydantic.config.ConfigDict].

model_fields

Metadata about the fields defined on the model, mapping of field names to [FieldInfo][pydantic.fields.FieldInfo].

Methods Summary

from_parsed(predicate, value)

Construct an xref object from pre-standardized content.

standardize()

Standardize the xref.

Attributes Documentation

model_computed_fields: ClassVar[dict[str, ComputedFieldInfo]] = {}

A dictionary of computed field names and their corresponding ComputedFieldInfo objects.

model_config: ClassVar[ConfigDict] = {}

Configuration for the model, should be a dictionary conforming to [ConfigDict][pydantic.config.ConfigDict].

model_fields: ClassVar[dict[str, FieldInfo]] = {'predicate': FieldInfo(annotation=Union[Reference, NoneType], required=False, description='The reference for the predicate'), 'predicate_raw': FieldInfo(annotation=str, required=False, default='oboinowl:hasDbXref'), 'standardized': FieldInfo(annotation=bool, required=False, default=False, exclude=True), 'value': FieldInfo(annotation=Union[Reference, NoneType], required=False, description='The reference for the value'), 'value_raw': FieldInfo(annotation=str, required=True, alias='val', alias_priority=2)}

Metadata about the fields defined on the model, mapping of field names to [FieldInfo][pydantic.fields.FieldInfo].

This replaces Model.__fields__ from Pydantic V1.

Methods Documentation

classmethod from_parsed(predicate: Reference, value: Reference) Xref[source]

Construct an xref object from pre-standardized content.

standardize() Self[source]

Standardize the xref.